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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914074.1_cds_XP_016464097.1_57163
CDS Infomation

[gene=LOC107787093] [db_xref=GeneID:107787093] [protein=ascorbate transporter, chloroplastic-like] [protein_id=XP_016464097.1] [location=join(16683..16737,18062..18642,19122..19229,19521..19676,19996..20211,20696..20905,22240..22377,22495..22596,22676..22741,23080..23164,23262..23359)] [gbkey=CDS]
Sequence

ATGGCAATCGGCGCCGTCGTTTCTAACCGGAATTTCGGTTGTTTCGTCGGTTCAGGCAGA
GAGCAGCGTATTAGCCGTGGAGATCGATTGGGTTGTGCTGCTTTGCAGTATGCTCAGAGG
AATATGTTATACAATGAGCGGTGTCTCTCAAGAAGTGGCTTGTCGTACTCCGGTTGCATT
TATAGGTCATATTCCCAATCTACTGAACCATTGGATGGTAAATCTTTTGGATCAAAAACA
CCATTTTATGTTGAAGTCATTCAACCTAACCGGTTTAGTGAAAGTTCTCATGTCATCAAT
CCTAGGCGAAGAACCAGAAGATGGGAATGTTATCTTTCCTCTGCTGACTCAGGTAACAGT
TGGGTTCAACCAAGGAAGCTGGATAAGCTTGGTTTCATTGATGGACAAAAGCAGCAGAAA
AAGCATGCTGCGGTAAATAGAACCCAAGCTGACTATAAATCTGATGAGTATGACATAACT
GGAGCTTTGGAGTCTCTTGTGTCATCGGAAGGGGCAAGTGAAGCCATTTTGGTGGAAGAA
GTTGAGCAATCAAAACCCTGGTGGGAGCAATTTCCAAGACGTTGGATTGTTGTACTGCTG
TGTTTTGCTGCATTTTTGTTATGCAACATGGATCGTGTGAACATGAGCATTGCAATTCTT
CCGATGTCAAAGGAATTTAACTGGAACAGCGCTACGGTTGGTCTCATCCAGTCTTCCTTC
TTCTGGGGCTATCTTCTCACTCAGATTGTTGGAGGGATATGGGCGGATAAATTTGGTGGG
AAGGTAGTGCTTGGCTTCGGAGTTGTCTGGTGGTCGATTGCAACTGTTTTAACTCCTATT
GCCGCCAGAATGGGACTTCCATTCTTACTTGTCGTGCGTGCCTTAATGGGTATTGGGGAG
GGTGTCGCGATGCCTGCCATGAATAATATGCTCTCAAAGTGGATTCCTGTCTCAGAAAGA
AGCAGATCTCTTGCCCTAGTGTATAGTGGAATGTATCTTGGTTCTGTTACAGGATTAGGT
TTCTCTCCTATTTTGATCCAGAAGTTCGGATGGCCATCAGTCTTCTATTCCTTTGGTTCT
CTTGGAAGCATCTGGTTTGCACTGTGGTTGACTAAGGCATATAGCTCTCCAAAAGATGAT
CCAGGGCTTAGTGCACAGGAAAAGAGGCTGATCATGGATGGCAGCGTCTCTAAGGAACCT
GTCTCTAACATCCCATGGAAACTAATTTTATCAAAGGCACCTGTCTGGGCCCTCATTATC
TCCCATTTCTGTCATAACTGGGGAACATTTATTCTACTGACATGGATGCCTACATACTAT
AGTCAGGTTTTAAAGTTCAACCTCACCGAATCAGGACTACTGTGTGTATTGCCATGGCTG
ACCATGGCCGTATTTGCAAATGTAGGTGGTTGGATTGCCGATACACTTGTGAGCAAAGGA
TTCTCCATAACATCAGTTCGTAAGATTATGCAATCTATTGGTTTTCTGGGCCCTGCTTTT
TTTCTTTCACAATTAAGCCATGTGAGGACTCCTGCATTAGCAGTGCTATGCATGGCATTC
AGTCAGGGATCGGATGCATTCTCTCAGTCTGGCCTCTACTCTAATCACCAAGACATTGGA
CCACGTTACGCTGGAGTGTTGTTGGGATTATCTAATACTGCTGGGGTGCTAGCTGGTGTC
TTCGGTACAGCTGCAACTGGATACATACTACAAAAAGGATCTTGGGATGATGTATTTAAG
GTGGCTGTTATATTATACATCATAGGCACATTAGTCTGGAATTTCTTCTCAACTGGAGAG
AGAATCCTCGAGTAG

Peptide Sequence

PEP ID

XP_016464097.1
PEP Infomation

PREDICTED: ascorbate transporter, chloroplastic-like [Nicotiana tabacum]
Sequence

MAIGAVVSNRNFGCFVGSGREQRISRGDRLGCAALQYAQRNMLYNERCLSRSGLSYSGCI
YRSYSQSTEPLDGKSFGSKTPFYVEVIQPNRFSESSHVINPRRRTRRWECYLSSADSGNS
WVQPRKLDKLGFIDGQKQQKKHAAVNRTQADYKSDEYDITGALESLVSSEGASEAILVEE
VEQSKPWWEQFPRRWIVVLLCFAAFLLCNMDRVNMSIAILPMSKEFNWNSATVGLIQSSF
FWGYLLTQIVGGIWADKFGGKVVLGFGVVWWSIATVLTPIAARMGLPFLLVVRALMGIGE
GVAMPAMNNMLSKWIPVSERSRSLALVYSGMYLGSVTGLGFSPILIQKFGWPSVFYSFGS
LGSIWFALWLTKAYSSPKDDPGLSAQEKRLIMDGSVSKEPVSNIPWKLILSKAPVWALII
SHFCHNWGTFILLTWMPTYYSQVLKFNLTESGLLCVLPWLTMAVFANVGGWIADTLVSKG
FSITSVRKIMQSIGFLGPAFFLSQLSHVRTPALAVLCMAFSQGSDAFSQSGLYSNHQDIG
PRYAGVLLGLSNTAGVLAGVFGTAATGYILQKGSWDDVFKVAVILYIIGTLVWNFFSTGE
RILE

Transcript Sequence

Gene sequence data has not been registered.